Install#
Installing in a conda environment (recommended)#
We highly recommend installing SCENIC+ in a new conda environment.
Create new environment:
$ conda create --name scenicplus python=3.11
Install SCENIC+ in environment:
$ conda activate scenicplus
$ git clone https://github.com/aertslab/scenicplus
$ cd scenicplus
$ git checkout development
$ pip install .
Checking version#
To check your SCENIC+ version
>>> import scenicplus
>>> scenicplus.__version__
'1.0a1'